Archive for July, 2009

Economically coping with creeping climate change

Friday, July 31st, 2009

I like alliteration. Sue me.

Today’s news release sees the head of the University of Idaho’s geography department, Harley Johansen, beginning a study on the economics of climate change.

The study will focus on 71 municipalities north of 65 degrees latitude, an invisible line cutting through the southern tips of Norway, Finland and Sweden, as well as northwest Russia. Because these areas are so far north, they’ve already been dealing with the affects of climate change for more than two decades.

Migration patterns of polar bears and caribou are getting messed up. Growing seasons and precipitation patterns are becoming wacky. Ocean currents are wreaking havoc on the fishing industries. All of these issues can greatly affect a small, isolated town’s economy.

But it can also lead to new opportunities.

New crops can be planted that were not possible before. Lands that were once unusable can now hold agriculture, dairy production and fur farming.

The study will look at basic economic indicators and interview a ton of the people responsible for the local economies. It’s basically trying to find out which towns are coping the best, what they’re doing and how it might be applied to America.

Because in another 25 years, there’s a good chance we’ll be facing the same problems.

Click here for the full press release.

On the top of Greenland

Thursday, July 30th, 2009

Hello again from Greenland.  Today, the New York Air National Guard flew us from Kangerlussuaq to Summit Station.  Summit is located on top of the Greenland Ice Sheet at 72 N, 38 W at an elevation of 3200 meters (about 10,500 feet).  We flew over the coast of Greenland, then over the edge of the Ice Sheet.  In summer, melt ponds develop here because the weather is above freezing.  The melt water bores its way down through the ice, developing holes called “moulins”.  From the surface, moulins appears as beautiful blue ponds.

By the time you reach the top of the Ice Sheet, the air temperature is below freezing.  The mean annual temperature at Summit Station is about -30 C (-22 F).  The summer average is -15 C (+5 F), the winter average -40 C (-40 F).  Summit experienced a very warm spell this summer when the temperature was 28 F for a couple of days.  Not above freezing, but really nice!

When we arrived, the station crew went right to work unloading the most precious cargo: fresh fruits and vegetables.  We were quickly put to work on the assembly line hauling boxes of goodies from the cargo into the kitchen refrigerator.

After acclimatizing tonight, we’ll meet with the station manager, construction manager, and science technicians about our project.  There’s a lot to talk about.

Von P. Walden, Geography

More images can be found here.

This ain’t a scene, it’s a genetic arms race

Thursday, July 30th, 2009

It seems $600,000 will go a long ways these days in genetic research.

The Initiative for Bioinformatics and Evolutionary Studies (IBEST) at the University of Idaho is slowly but surely accumulating machinery, computational abilities and the faculty to use them, in the race for genetic research supremacy. The result is one of the best comprehensive bioinformatics research facilities in the west.

The most recent addition is that of a pyrosequencing machine made by 454 Life Sciences, a Roche Company. The machine is capable of sequencing 1 billion base pairs in a 24-hour period, or about 1/3 of the human genome. Thus, what took scientists over a decade to accomplish, would now take a matter of weeks at just the University of Idaho.

So how does it work? Well, it’s complicated, but the best way to describe it is a series of photographs of chemical reactions.

A plate contains about 600,000 strands of DNA to be sequenced. DNA is made up of just 4 chemicals called nucleotides that only bind to one another. So the machine releases a bunch of one nucleotide, which will bind with only one other type.

If the next nucleotide in the sequence is the one that will bind, a chemical reaction causes a flash of light when it happens. A camera takes a photo and captures this flash. Then another type of nucleotides is released. A photo is taken. Then another kind. And you get the picture.

By doing this really, really fast, the machine has a series of photos that it uses to determine the series of nucleotides that the DNA is made up of.

This is pretty complicated, and it’s hard to describe in this short space, so check out this video, or this one, for a clearer picture of what is going on.

Or check out the press release.

The Greenland Ice Sheet - Up close!

Wednesday, July 29th, 2009
View of Kangerlussuag.

View of Kangerlussuag.

We had a layover in Kangerlussuaq today.  One of the most popular things to do here is to travel to the end of the road going East, which happens to end at the Greenland Ice Sheet.  The road is dirt for 25 km (about 15.5 miles), so my colleague, Matt Shupe, and I decided to ride mountain bikes.  This seemed like a great idea for the first 10 miles.  Then we got tired and hungry.  So here are the photos from this trip.  Check out the musk oxen (brown dots on top of hill) and all the beautiful pictures of tundra and ice.  What a beautiful spot!  (Another day in Kanger)

Tomorrow we head to Summit Station up on this very ice sheet.  72 South, 38 West and 3200 meters above sea level.  Then we can finally get to work.  More soon…

Von P. Walden, Geography

Sleepy in Kangerlussuaq

Monday, July 27th, 2009

Hello from Greenland,

After 3.5 hours of sleep in Albany, New York, I was up at 4:30 am to check a ride to Stratton Air Force Base.  Once on the Base, we dropped off our packs and duffel bags in the hangar where the New York Air National Guard was packing.  When we check in, the warning sign indicated that this was not going to be a typical flight; “No shotguns with barrels less than 18 inches!!”.

Air National Guard loads cargo for the C-130 aircraft.

Air National Guard loads cargo for the C-130 aircraft.

This is not your typical air safety bulletin!

This is not your typical air safety bulletin!

The flight was so full of passengers and cargo that we needed to stop halfway in Goose Bay, Canada to refuel.  We were all more than glad to stretch our legs.  After a few more hours of flying, we reached the coast of Greenland.  Beautiful!  We were very excited to see multi-layered stratocumulus clouds, since we’ll be studying clouds at Summit!

Loading onto the C-130.

Loading onto the C-130.

Crammed in to the plane like sardines.

Crammed in to the plane like sardines.

Afrer pounding down a Musk Ox Burger for dinner (bleech…), we took a walk along the river that flows into the long fiord.  The river is running pretty swiftly now as the summer melt is in full swing.

Von P. Walden, Geography

The first glimpse of Greenland and its clouds.

The first glimpse of Greenland and its clouds.

Evolution by the numbers

Monday, July 27th, 2009

Because the National Science Foundation and other government entities give grant awards in the summer - mainly in July - I’ve been busy writing about new projects. And since science studies typically take several years, there haven’t been a whole lot of results to share in the past couple of months. So today’s post is exciting - well, at least it is to me - because it’s reporting on findings that were published last week in the Proceedings of the National Academy of Science.

The gist of the paper goes a little something like this. Archaeologists the world over are constantly digging up fossils and sticking an approximate date on the animal’s demise. Based on skeletal structure, they can analyze the history of the evolutionary tree and learn things like how many species have become extinct, how many new ones have been created, which species are related, when the evolution took place and about how long it took.

The only issue with this method is that it requires the skeletons be found first. Since not every fossil in the world has been found, there are gaps in the information for some groups of animals during different time periods.

So Luke Harmon - professor of biological sciences - and colleagues from UCLA took a different approach. They used genetic information to solve the puzzle. They created a giant “family tree” consisting of all the jawed-vertebrates ranging from fish to birds to people and used a computer program to answer the same questions posed by archaeologists.

What they found is pretty cool.

The number of new species being formed is just about equal to the number becoming extinct. But it doesn’t happen at a constant rate. Different orders and families of animals experience bursts of evolution and then remain stagnant for a time.

Given their age and number of different species, frogs in general are no more diverse than they should be, even though it seems like there’s a billion different kinds. Neoaves - modern birds - are much more diverse then they should be, as are percomorphs - fish related to perch.

On the other end of the spectrum, some families are much less diverse than they should be. Tuatara and crocodilians are exceptionally strange. Both are more than 200 million years old but have just 2 and 23 species, respectively. Even in the past, they had less diversity than they should have.

This implies that there must be mechanisms that elevate speciation and some that depress it. Scientists aren’t sure what causes a group of animals to neither evolve nor die out for such a long period of time, but there must be something to it in order for these “living fossils” to exist.

For more information, check out the PNAS article online or the recent press release.

You’re glowing! No, really…

Friday, July 24th, 2009

Here’s a really cool science story from LiveScience. Chances are you’ve seen it on Yahoo!, MSN or a similar website. But it turns out that due to some photochemical reactions between light and your skin, you glow! Everyone glows!

So the next time a beautiful woman walks into the room, tell her she lights up the room. It’s not just a line anymore!

My Sediments Exactly

Wednesday, July 22nd, 2009
Elowyn Yager poses with students from the University of Idaho. Yager’s ability to provide research experience to students is partly responsible for the awarding of her new grant.

Elowyn Yager poses with students from the University of Idaho. Yager’s ability to provide research experience to students is partly responsible for the awarding of her new grant.

I recently had the pleasure of speaking with Elowyn Yager, a recent addition to the University of Idaho faculty, who researches sediment in mountain streams and rivers at the Center for Ecohydraulics Research in Boise. Yager recently won a very prestigious grant from the National Science Foundation reserved for the best and brightest young scientists in the country called the CAREER award.

Her research is geared toward understanding how changes in the landscape will equate to changes in the rivers and their ecosystems. For example, when a fire or logging company thins a forest, the soil becomes loose and is eroded more easily. This means more soil in the river being washed downstream. Trying to predict what will happen to that soil is an important topic for fields like river restoration, trout spawning and other environmental concerns.

I think the coolest part of what she does is a giant flume in the basement of the Center for Ecohydraulics Research that mimics the flow of a mountain river. The thing is nearly 70 feet long, 6 feet wide and can be placed at an 11 percent incline. Scientists model river flows and add scaled down sand and gravel to mimic natural sediment. Then they watch to see what happens.

Another intersting aspect of this story is that Yager already created an equation that does a pretty good job describing what will happen to sediment in certain conditions for her dissertation. But that wasn’t good enough. She wants to understand why the equation works and what the underlying forces that affect the system are.

For more information, see the full press release, or check out the Center for Ecohydraulics Research website.

And if you know anyone interested in this kind of research, the grant will also fund four students, and I believe they are currently accepting applications.

Geography Faculty Member travels to the Greenland Ice Sheet

Wednesday, July 22nd, 2009

Hi Everyone,

I was recently awarded a 5-year, $900,000 grant to study clouds over the Greenland Ice Sheet from the National Science Foundation.  This project is part of the Arctic Observing System (AON), which was started during the International Polar Year (IPY).  [More info on the IPY can be found at http://www.ipy.org/ ].  As part of this project, I’m heading to Summit, Greenland (72 N, 38 W) for a site visit.  Summit Station is on top of the ice sheet at 3200 meters (10,500 feet)!  After this visit, we plan to deploy equipment to remotely sense clouds in April/May 2010.  The instrumentation will operate at Summit until at least 2014.  Note that this is a collaborative project with researchers from U. Colorado and U. Wisconsin-Madison.   View the abstract of our NSF project here.

I leave Moscow this Sunday (26 July).  While on my trip, I’ll provide blogs from time to time.  Please check back again soon to check on my progress!

Von P. Walden, Associate Professor of Geography

Science Times Tuesday 7/21

Tuesday, July 21st, 2009

It’s Tuesday again, and I’m actually remembering to do an update on what the New York Times has to say about science this week. I know I missed it last week, but it was actually a really good week. Every single story had something to do with landing on the moon for the first time. You can still check them out in the archives.

This week my favorite piece is about using technology to fight a war against fake drugs written by Thomas Fuller. It’s an issue that I didn’t even know exited and a war being fought with machines I wouldn’t have thought of using for the job.

The article outlines how many areas reputable for making cocaine in southeast Asia are also into making fake malaria pills to sell to African governments and citizens. Most pills contain a small dose of a cheap pain reliever so that people think they’re being helped when really they’re not. According to one report, about one in five malaria pills in Africa are fake.

So what are people doing about it? Using science to fight back!

A mass spectrometer is a machine that takes a small sample from whatever substance is being analyzed and breaks it down into its individual molecules. It then measures the mass of each of those molecules to determine exactly what elements are in the compound. The types, amounts and combination of elements and molecules tell scientists exactly what the compound is.

It’s an interesting read, and I suggest you take a look.

Elsewhere in today’s paper is:

  • What fewer sunspots means for climate change and how scientists actually have no clue how to predict what the sun is going to do.
  • Ever wonder how every scientist in the world can agree on the definition of a single word that could have many different meanings to different people? In the case of behavioral scientists, they can’t!
  • An interview with Alan Boss about the new Kepler telescope recently launched into orbit designed to search for Earth-like planets in other solar systems.
  • Monkeys were able recently to train their brains to control a computer and remember how to do it again and again.